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AustinWoman Electromagnetic Voxels

An Open Source Model Constructed from the Visible Human Dataset

Problem Regions

There are various regions in the Visible Human Dataset, where the model is less precise than expected. These regions include areas where the boundaries are very blurred, artifacts exist, or the images are different from what would be expected based on our knowledge of anatomy. For example, reconstructing the homogeneous model shows that the ear lobes look abnormal.

Table 3: Problem Regions (Updated: 2/5/2014)

Slices Problem Regions Why?
1020-1045Dura Mater"Typically, with age, the dura mater thickness changes from 0.3 to 0.8 mm." [14] It is too thick at the top of the head. It is hard to identify and discontinuous elsewhere because of its thickness.
1090-1175Sinus CavitiesIt is difficult to determine the boundary between the air and the mucous membrane in the sinus cavities. Often, the membrane appears much thicker than it is supposed to be, perhaps because one can see down into the cavity due to the nature of how the images were obtained. Since the membrane is typically less than 1mm thick, it was omitted and the cavities were labeled as air.
1103-1141Orbital CavitiesBoundary between fat and bone cortical is difficult to distinguish due to their similar colors.
1107-1122Spinal CordIt is unclear where the spinal cord starts in this set of slices. It is labeled starting in slice 1115.
1109-1133EyesBoundary between eye sclera and vitreous humor is difficult to distinguish due to their similar colors.
1117-1162Nasal CavitiesIt is hard to differentiate nasal cavity from bone. The boundaries are not clear due to mucous membrane (which was labeled as air, see sinus cavities).
1127-1142Internal Carotid ArteryRegion surrounding internal carotid artery is difficult to identify. Currently, the artery is labeled as a blood vessel and is surrounded by air. This is a known error.
1128-1156Spinal Cord / CerebellumBoundary between spinal cord and cerebellum is very hard to distinguish in this set of slices.
1135-1145Temporalis Tendon and MandibleDifficult to distinguish the transition between the tendon and fat.
1137-1155Mucous MembraneBoundary between mucous membrane and fat is hard to distinguish due to their similar colors.
1148-1229 (Right), 1151-1230 (Left) Glands near ear canal The colors are similar between the fat and glands. Additionally, the muscle, fat, and skin boundary is difficult to determine.
1175-1181 (Right), 1180-1184 (Left)Ear LobesTwo ear lobes are missing in the model.
1250-1256ChinThere is no skin under chin.
1433-1628DiaphragmBoundaries between diaphragm-liver and diaphragm-muscle are difficult to distinguish.
1500-1517Esophagus/AortaThe transition from esophagus to aorta is unclear.
1600-1699DuodenumBoundaries between duodenum-stomach and duodenum-small intestine are difficult to distinguish.
1680-1843HandsIt is difficult to distinguish the boundaries between the fat, skin, and tendon regions due to their similar colors and complexity.
2187-2300KneesIt is difficult to distinguis the boundaries between the fat, ligament, meniscus, and tendon regions.
2690-2730FeetIt is difficult to distinguish the boundaries between the fat, skin, bone, and tendon regions due to their similar colors and complexity.
Whole bodyBone Marrow / Bone CorticalThroughout most of the body, it is difficult to determine the boundary between the bone cortical and bone marrow. This occurs for several reasons: (i) the bone cortical is sometimes very thin. (ii) Efforts were made to label the yellow bone marrow, whose color is similar to bone cortical.
Whole bodyBlood VesselsDue to their small nature and complexity, smaller blood vessels were not labeled. This is especially true for the upper part of the body.
Whole bodyNervesNerves are often similar in color to the tissue that surrounds them and not well labeled in [9]. As a result, the nerves are missing in parts of the body.
Whole bodyLymphThe lymphs are often similar in appearance to the tissue that surrounds them. As a result, they are missing in several places.
Whole bodyDense Connective Tissue / Tendon / FatIt is unclear where the boundaries for each of these regions should be. Efforts were made to be consistent and continuous throughout the model.
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