Basic Statistics
Measure | Value |
---|---|
Filename | 50knuclei_S56_L007_R2_001.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 10238063 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 46 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TAGGACG | 4300 | 0.0 | 14.225899 | 4 |
GTCTAAG | 5445 | 0.0 | 12.424239 | 1 |
GTCCTAC | 6090 | 0.0 | 12.408288 | 1 |
CTATACT | 6115 | 0.0 | 12.121881 | 4 |
AGGACGT | 5295 | 0.0 | 11.280837 | 5 |
GTGTAGG | 7650 | 0.0 | 11.195032 | 1 |
GTATAAG | 5025 | 0.0 | 10.884723 | 1 |
GTAGGAC | 6215 | 0.0 | 10.768892 | 3 |
TCTATAC | 5640 | 0.0 | 10.590786 | 3 |
TATACTG | 6340 | 0.0 | 10.556572 | 5 |
GTATAGC | 5030 | 0.0 | 10.301592 | 1 |
TATACAG | 9585 | 0.0 | 10.286265 | 5 |
CTAGGAC | 6930 | 0.0 | 10.280901 | 3 |
GTCTAGG | 5210 | 0.0 | 10.2219515 | 1 |
TAGACCG | 1280 | 1.4078978E-9 | 10.120262 | 5 |
TAGACTG | 7710 | 0.0 | 10.080884 | 5 |
CTACACT | 7930 | 0.0 | 9.891964 | 4 |
GTCCTAG | 6555 | 0.0 | 9.881199 | 1 |
TGTACTG | 8445 | 0.0 | 9.800031 | 5 |
GTATAGG | 3980 | 0.0 | 9.764511 | 1 |